GREENGATE GENOMICS
REFERENCES

REFERENCES

 

Jia, Z., Lipus, D., Burckhardt, O., Bussert, R., Sondermann, M., Bartholomäus, A., … & Kallmeyer, J. (2023). Enrichment of rare methanogenic Archaea shows their important ecological role in natural high-CO2 terrestrial subsurface environments. Frontiers in Microbiology, 14, 1105259.

https://www.frontiersin.org/articles/10.3389/fmicb.2023.1105259/full

Mitzscherling, J., MacLean, J., Lipus, D., Bartholomäus, A., Mangelsdorf, K., Lipski, A., Roddatis, V., Liebner, S. and Wagner, D., 2022. Nocardioides alcanivorans sp. nov., a novel hexadecane-degrading species isolated from plastic waste. International Journal of Systematic and Evolutionary Microbiology72(4), p.005319.

https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005319?crawler=true

Mitzscherling, J., MacLean, J., Lipus, D., Bartholomäus, A., Mangelsdorf, K., Lipski, A., Roddatis, V., Liebner, S. and Wagner, D., 2022. Paenalcaligenes niemegkensis sp. nov., a novel species of the family Alcaligenaceae isolated from plastic waste. International Journal of Systematic and Evolutionary Microbiology71(4), p.005333.
 

https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005333?crawler=true

Yang, S., Liebner, S., Walz, J., Knoblauch, C., Bornemann, T.L., Probst, A.J., Wagner, D., Jetten, M.S. and in ‘t Zandt, M.H., 2021. Effects of a long‐term anoxic warming scenario on microbial community structure and functional potential of permafrost‐affected soil. Permafrost and Periglacial Processes32(4), pp.641-656.
 

https://onlinelibrary.wiley.com/doi/10.1002/ppp.2131

Yang, S., Liebner, S., Svenning, M.M. and Tveit, A.T., 2021. Decoupling of microbial community dynamics and functions in Arctic peat soil exposed to short term warming. Molecular Ecology30(20), pp.5094-5104.

 

https://onlinelibrary.wiley.com/doi/10.1111/mec.16118

Schulze-Makuch, D., Lipus, D., Arens, F.L., Baqué, M., Bornemann, T.L., deVere, J.P., Flury, M., Frösler, J., Heinz, J., Hwang, Y. and Kounaves, S.P., 2021. Microbial hotspots in lithic microhabitats inferred from DNA fractionation and metagenomics in the Atacama Desert. Microorganisms9(5), p.1038.
 

https://www.mdpi.com/2076-2607/9/5/1038

Liu, Q., Adler, K., Lipus, D., Kämpf, H., Bussert, R., Plessen, B., Schulz, H.M., Krauze, P., Horn, F., Wagner, D. and Mangelsdorf, K., 2020. Microbial Signatures in Deep CO2-Saturated Miocene Sediments of the Active Hartoušov Mofette System (NW Czech Republic). Frontiers in microbiology, p.3182.
 

https://www.frontiersin.org/articles/10.3389/fmicb.2020.543260/full

Lipus, D., Vikram, A., Gulliver, D. and Bibby, K., 2019. Upregulation of peroxide scavenging enzymes and multidrug efflux proteins highlight an active sodium hypochlorite response in Pseudomonas fluorescens biofilms. Biofouling35(3), pp.329-339.

https://www.tandfonline.com/doi/abs/10.1080/08927014.2019.1605357

Liu, Q., Kämpf, H., Bussert, R., Krauze, P., Horn, F., Nickschick, T., Plessen, B., Wagner, D. and Alawi, M., 2018. Influence of CO2 degassing on the microbial community in a dry mofette field in Hartoušov, Czech Republic (Western Eger Rift). Frontiers in microbiology, p.2787.
 

https://www.frontiersin.org/articles/10.3389/fmicb.2018.02787/full

Lipus, D., Roy, D., Khan, E., Ross, D., Vikram, A., Gulliver, D., Hammack, R. and Bibby, K., 2018. Microbial communities in Bakken region produced water. FEMS microbiology letters365(12), p.fny107.
 

https://academic.oup.com/femsle/article/365/12/fny107/4982779?login=true

MacLean, J., Bartholomäus, A., Blukis, R., Liebner, S., & Wagner, D. (2023). Metatranscriptomics of microbial biofilm succession on HDPE foil: uncovering plastic-degrading potential in soil communities.

https://www.researchsquare.com/article/rs-3014809/v1

Krauze, P., Kämpf, H., Horn, F., Liu, Q., Voropaev, A., Wagner, D. and Alawi, M., 2017. Microbiological and geochemical survey of CO2-dominated mofette and mineral waters of the Cheb Basin, Czech Republic. Frontiers in microbiology8, p.2446.

https://www.frontiersin.org/articles/10.3389/fmicb.2017.02446/full

Jia, Z., Lipus, D., Burckhardt, O., Bussert, R., Sondermann, M., Bartholomäus, A., … & Kallmeyer, J. (2023). Enrichment of rare methanogenic Archaea shows their important ecological role in natural high-CO2 terrestrial subsurface environments. Frontiers in Microbiology, 14, 1105259
 
 
Yang, S., Liebner, S., Winkel, M., Alawi, M., Horn, F., Dörfer, C., Ollivier, J., He, J.S., Jin, H., Kühn, P. and Schloter, M., 2017. In-depth analysis of core methanogenic communities from high elevation permafrost-affected wetlands. Soil Biology and Biochemistry111, pp.66-77.

https://doi.org/10.1016/j.soilbio.2017.03.007

https://doi.org/10.3390/microorganisms9091876

Lipus, D., Vikram, A., Ross, D., Bain, D., Gulliver, D., Hammack, R. and Bibby, K., 2017. Predominance and metabolic potential of Halanaerobium spp. in produced water from hydraulically fractured Marcellus shale wells. Applied and environmental microbiology83(8), pp.e02659-16.
 

https://journals.asm.org/doi/abs/10.1128/aem.02659-16

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